Hello
You can remove the error by making another transport from the source system. Transport the affected function groups once more in their entirety. To do this, use the transport object R3TR FUGR
Have you tried this ?
Also check the recommendation from this SAP note but they are for different FM's.
Note 822379 - Known problems with Support Packages in SAP NW 7.0x AS ABAP
Regards
RB